U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX5843248: Morphoseq long fragment end library of Arcobacter butzleri, Strain JV22
1 ILLUMINA (Illumina NovaSeq 6000) run: 192,285 spots, 56.9M bases, 19Mb downloads

Design: Morphoseq long fragment end library
Submitted by: University of Technology Sydney
Study: Development & evaluation of Morphoseq synthetic long read sequencing technology
show Abstracthide Abstract
This project aims to evaluate a new method for generating synthetic long reads from short read (Illumina, BGI, etc) sequencing data. Long templates (8-10kbp) are randomly mutagenized using primer extension in the presence of the nucleotide analogue dPTP, which can base pair with A or G. The dPTP is then removed and a random set of mutations are fixed via a further primer extension in the presence of only natural nucleotides. Finally, a targeted number of the mutagenized templates are replicated with PCR and used to make a short read sequencing library. Short reads from the same template can be identified via the presence of shared mutations in overlapping regions.
Sample: MIGS Cultured Bacterial/Archaeal sample from Arcobacter butzleri JV22
SAMN00210774 • SRS172368 • All experiments • All runs
Library:
Name: HM-298D
Instrument: Illumina NovaSeq 6000
Strategy: OTHER
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 192,285 spots, 56.9M bases, 19Mb
Run# of Spots# of BasesSizePublished
SRR9067180192,28556.9M19Mb2020-05-20

ID:
7852655

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...